Subroutine Coverage
| blib/lib/diffReps/ChromaModSite.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
13 |
51 |
25.4
|
| pod |
0 |
9 |
0.0
|
| line |
count |
pod |
subroutine |
|
1
|
1 |
n/a |
BEGIN |
|
6
|
1 |
n/a |
BEGIN |
|
7
|
1 |
n/a |
BEGIN |
|
8
|
1 |
n/a |
BEGIN |
|
14
|
0 |
No |
new |
|
48
|
0 |
No |
dcopy |
|
66
|
0 |
No |
init |
|
93
|
0 |
No |
expand |
|
115
|
0 |
No |
print_reg |
|
150
|
0 |
No |
needStat |
|
156
|
0 |
No |
retrieve_norm_cnt |
|
212
|
0 |
No |
retrieve_raw_sum |
|
225
|
0 |
No |
isWithinGap |
|
235
|
1 |
n/a |
BEGIN |
|
236
|
1 |
n/a |
BEGIN |
|
237
|
1 |
n/a |
BEGIN |
|
238
|
1 |
n/a |
BEGIN |
|
239
|
1 |
n/a |
BEGIN |
|
240
|
1 |
n/a |
BEGIN |
|
244
|
0 |
n/a |
new |
|
269
|
0 |
n/a |
set_chrom |
|
286
|
0 |
n/a |
reset_winN |
|
292
|
0 |
n/a |
reset_content |
|
309
|
0 |
n/a |
retrieve_new_cnt |
|
317
|
0 |
n/a |
move_forward |
|
351
|
0 |
n/a |
get_winN |
|
358
|
0 |
n/a |
get_chrom |
|
364
|
0 |
n/a |
get_cnt_tr |
|
368
|
0 |
n/a |
get_cnt_co |
|
372
|
0 |
n/a |
get_cnt_tr_ |
|
376
|
0 |
n/a |
get_cnt_co_ |
|
380
|
0 |
n/a |
get_cnt_btr |
|
384
|
0 |
n/a |
get_cnt_bco |
|
390
|
0 |
n/a |
get_diff_info |
|
400
|
0 |
n/a |
retrieve_norm_cnt |
|
454
|
0 |
n/a |
retrieve_raw_sum |
|
467
|
0 |
n/a |
isAboveCutoff |
|
519
|
0 |
n/a |
calc_stat |
|
589
|
0 |
n/a |
raw_sum_mean |
|
598
|
0 |
n/a |
raw_sum_var |
|
622
|
1 |
n/a |
BEGIN |
|
623
|
1 |
n/a |
BEGIN |
|
624
|
1 |
n/a |
BEGIN |
|
628
|
0 |
n/a |
new |
|
639
|
0 |
n/a |
add |
|
648
|
0 |
n/a |
add_del |
|
657
|
0 |
n/a |
append_list |
|
666
|
0 |
n/a |
sort |
|
672
|
0 |
n/a |
adjPval |
|
696
|
0 |
n/a |
gen_header |
|
703
|
0 |
n/a |
output |