Subroutine Coverage
| blib/lib/BioX/Wrapper/Annovar.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
8 |
23 |
34.7
|
| pod |
|
|
n/a
|
| line |
count |
pod |
subroutine |
|
5
|
1 |
n/a |
BEGIN |
|
6
|
1 |
n/a |
BEGIN |
|
7
|
1 |
n/a |
BEGIN |
|
8
|
1 |
n/a |
BEGIN |
|
9
|
1 |
n/a |
BEGIN |
|
10
|
1 |
n/a |
BEGIN |
|
11
|
1 |
n/a |
BEGIN |
|
12
|
1 |
n/a |
BEGIN |
|
420
|
0 |
n/a |
run |
|
456
|
0 |
n/a |
check_files |
|
485
|
0 |
n/a |
find_vcfs |
|
505
|
0 |
n/a |
parse_commands |
|
534
|
0 |
n/a |
write_annovar |
|
589
|
0 |
n/a |
iter_vcfs |
|
614
|
0 |
n/a |
get_samples |
|
665
|
0 |
n/a |
convert_annovar |
|
677
|
0 |
n/a |
table_annovar |
|
697
|
0 |
n/a |
vcf_annotate |
|
733
|
0 |
n/a |
gen_descr |
|
757
|
0 |
n/a |
gen_annot |
|
805
|
0 |
n/a |
gen_cols |
|
835
|
0 |
n/a |
merge_vcfs |
|
865
|
0 |
n/a |
subset_vcfs |