| blib/lib/Bio/Tools/Run/Alignment/Gmap.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 2 | 24 | 8.3 |
| line | true | false | branch |
|---|---|---|---|
| 142 | 0 | 0 | unless open GMAPRUN, "$str |" |
| 169 | 0 | 6 | if @_ |
| 188 | 0 | 3 | if @_ |
| 207 | 0 | 0 | if @_ |
| 226 | 0 | 0 | if @_ |
| 244 | 0 | 0 | if @_ |
| 263 | 0 | 0 | if @_ |
| 299 | 0 | 0 | if (ref($seqs) =~ /ARRAY/i) |
| 301 | 0 | 0 | unless $seq->isa('Bio::PrimarySeqI') |
| 311 | 0 | 0 | if ($seq_count == 0) |
| 327 | 0 | 0 | $^O =~ /mswin/i ? : |
| 336 | 0 | 0 | unless open GMAPRUN, "$str |" |