| blib/lib/Bio/Tools/Run/WrapperBase/CommandExts.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 21 | 32 | 65.6 |
| pod | 9 | 17 | 52.9 |
| line | count | pod | subroutine |
|---|---|---|---|
| 411 | 5 | n/a | BEGIN |
| 412 | 5 | n/a | BEGIN |
| 413 | 5 | n/a | BEGIN |
| 415 | 5 | n/a | BEGIN |
| 416 | 5 | n/a | BEGIN |
| 417 | 5 | n/a | BEGIN |
| 418 | 5 | n/a | BEGIN |
| 438 | 4 | Yes | new |
| 521 | 10 | Yes | program_name |
| 537 | 32 | Yes | program_dir |
| 592 | 2 | n/a | _translate_params |
| 703 | 3 | Yes | executable |
| 737 | 12 | No | executables |
| 774 | 23 | n/a | _find_executable |
| 827 | 4 | n/a | _register_composite_commands |
| 868 | 0 | n/a | _create_factory_set |
| 895 | 0 | n/a | _collate_subcmd_args |
| 937 | 0 | n/a | _run |
| 1052 | 0 | No | no_throw_on_crash |
| 1068 | 0 | No | last_execution |
| 1083 | 0 | n/a | _dash_switch |
| 1126 | 0 | No | stdout |
| 1144 | 0 | No | stderr |
| 1162 | 43 | No | is_pseudo |
| 1181 | 0 | n/a | AUTOLOAD |
| 1205 | 14 | Yes | set_parameters |
| 1266 | 2 | Yes | reset_parameters |
| 1309 | 339 | Yes | parameters_changed |
| 1327 | 9 | Yes | available_parameters |
| 1358 | 0 | No | available_commands |
| 1359 | 0 | No | filespec |
| 1373 | 2 | Yes | get_parameters |