| blib/lib/Bio/Tools/Run/TigrAssembler.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 2 | 20 | 10.0 |
| line | true | false | branch |
|---|---|---|---|
| 209 | 1 | 1 | unless defined $self->program_name |
| 281 | 0 | 0 | if ($self->verbose >= 0) |
| 288 | 0 | 0 | if ($ref and $ref eq 'SCALAR') { } |
| 300 | 0 | 0 | unless IPC::Run::run(@ipc_args) |
| 302 | 0 | 0 | if ($@) |
| 305 | 0 | 0 | if $stderr_file |
| 339 | 0 | 0 | if (ref($seqs) =~ /ARRAY/i) |
| 344 | 0 | 0 | if ($seq->length >= $min_len) { } |
| 346 | 0 | 0 | if ($quals) |
| 354 | 0 | 0 | if (scalar @removed > 0) |