| line |
true |
false |
branch |
|
218
|
0 |
3 |
if $ENV{'FOOTPRINTER_DIR'} |
|
238
|
0 |
0 |
unless ($ENV{'FOOTPRINTER_DIR'}) |
|
251
|
0 |
12 |
unless $Bio::Tools::Run::FootPrinter::OK_FIELD{$attr} |
|
252
|
10 |
2 |
if @_ |
|
273
|
0 |
11 |
if $attr =~ /^-/ |
|
277
|
0 |
1 |
if (not $self->tree and -e $ENV{'FOOTPRINTER_DIR'} . '/tree_of_life') |
|
281
|
0 |
1 |
unless ($self->tree) |
|
304
|
0 |
0 |
unless $#seq > 0 |
|
305
|
0 |
0 |
unless $self->tree |
|
337
|
0 |
0 |
if ($self->verbose <= 0) |
|
338
|
0 |
0 |
$^O =~ /mswin/i ? : |
|
344
|
0 |
0 |
unless opendir my $cwd_dir, $cwd |
|
347
|
0 |
0 |
if ($thing =~ /^mlc\./) |
|
354
|
0 |
0 |
unless $status == 0 or $status == 256 |
|
357
|
0 |
0 |
unless (open FP, $outfile) |
|
367
|
0 |
0 |
unless ($self->save_tempfiles) |
|
372
|
0 |
0 |
unless opendir $cwd_dir, $cwd |
|
374
|
0 |
0 |
if ($thing =~ /^mlc\./) |
|
375
|
0 |
0 |
unless $ok_files{$thing} |
|
405
|
0 |
0 |
if $attr =~ /TREE/i |
|
406
|
0 |
0 |
unless defined $value |
|
409
|
0 |
0 |
if ($attr_key eq 'losses' and $value =~ /^\s*(somewhat|very)?\s*significant\s*$/) |
|
411
|
0 |
0 |
if (defined $1) |
|
412
|
0 |
0 |
if ($1 eq 'somewhat') { } |
|
419
|
0 |
0 |
unless -f $value |
|
427
|
0 |
0 |
unless $value |
|
433
|
0 |
0 |
unless $self->html |
|
434
|
0 |
0 |
unless $self->ps |
|
455
|
0 |
0 |
if (defined $outfile1) { } |
|
463
|
0 |
0 |
unless $seq->isa('Bio::PrimarySeqI') |