| blib/lib/Bio/Tools/Run/Alignment/Muscle.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 11 | 19 | 57.8 |
| pod | 9 | 9 | 100.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 108 | 1 | n/a | BEGIN |
| 109 | 1 | n/a | BEGIN |
| 110 | 1 | n/a | BEGIN |
| 111 | 1 | n/a | BEGIN |
| 112 | 1 | n/a | BEGIN |
| 113 | 1 | n/a | BEGIN |
| 115 | 1 | n/a | BEGIN |
| 141 | 1 | Yes | new |
| 177 | 6 | Yes | program_name |
| 191 | 3 | Yes | program_dir |
| 205 | 0 | Yes | error_string |
| 224 | 0 | Yes | version |
| 245 | 0 | Yes | run |
| 272 | 0 | Yes | align |
| 316 | 0 | Yes | profile |
| 397 | 1 | Yes | aformat |
| 417 | 0 | n/a | _run |
| 457 | 0 | n/a | _setinput |
| 535 | 0 | n/a | _setparams |