| blib/lib/Bio/Tools/Run/Phylo/PAML/Yn00.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 0 | 18 | 0.0 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 237 | 0 | 0 | 0 | not ref $aln and -e $aln |
| 345 | 0 | 0 | 0 | ref $aln and $aln->isa('Bio::Align::AlignI') |
| 394 | 0 | 0 | 0 | ref($Bio::Tools::Run::Phylo::PAML::Yn00::VALIDVALUES{$param}) =~ /ARRAY/i and scalar @{$Bio::Tools::Run::Phylo::PAML::Yn00::VALIDVALUES{$param};} > 0 |
| 425 | 0 | 0 | 0 | defined $self->{'_codemlparams'}{$param} and $keepold |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 230 | 0 | 0 | 0 | $aln ||= $self->alignment |
| 281 | 0 | 0 | 0 | grep {/\berr(or)?: /io;} @output or not $exit_status |