| line |
true |
false |
branch |
|
129
|
0 |
185 |
unless defined $start |
|
130
|
0 |
185 |
unless defined $end |
|
132
|
0 |
185 |
if ($start > $end) { } |
|
155
|
3 |
22 |
if @_ |
|
170
|
3 |
280 |
if @_ |
|
186
|
3 |
147 |
if @_ |
|
212
|
3 |
2 |
unless ($self->parsed) |
|
221
|
3 |
0 |
if @_ and $_[0] |
|
235
|
3 |
6 |
if (/Score\s+(\-?\d+(\.\d+)?)/) |
|
239
|
3 |
6 |
if (/Query\s+(?:protein|model)\:\s+(\S+)/) |
|
243
|
3 |
6 |
if (/Target Sequence\s+(\S+)/) |
|
247
|
6 |
3 |
unless /Gene\s+\d+\n/ |
|
262
|
0 |
3 |
$type ? : |
|
276
|
0 |
3 |
unless (@exons = $gene_txt =~ /(Exon .+\s+Supporting .+)/g) |
|
292
|
3 |
51 |
unless $transcript->strand != 0 |
|
304
|
54 |
0 |
if ($self->_prot_id) |
|
308
|
54 |
0 |
if ($e =~ /Supporting\s+(\d+)\s+(\d+)\s+(\d+)\s+(\d+)/) |
|
337
|
54 |
0 |
if ($self->_prot_id) |