| Bio/DB/IndexedBase.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 36 | 57 | 63.1 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 399 | 9 | 0 | 0 | $^O =~ /^MSWin/i and eval 'use Win32; 1' |
| 746 | 25 | 0 | 20 | not defined $start || defined $stop || defined $strand and $id =~ /$compound_id/x |
| line | l | !l | condition |
|---|---|---|---|
| 383 | 0 | 20 | $opts{'-debug'} || 0 |
| 20 | 0 | $opts{'-glob'} || eval '$' . $class . '::file_glob' || '*' | |
| 0 | 20 | $opts{'-maxopen'} || 32 | |
| 3 | 17 | $opts{'-clean'} || 0 | |
| 0 | 20 | $opts{'-dbmargs'} || undef | |
| 389 | 1 | 19 | ref $path || '' |
| 671 | 0 | 20 | (stat $index)[9] || 0 |
| 680 | 63 | 0 | (stat $file)[9] || 0 |
| 755 | 7 | 2 | $self->length($id) || 0 |
| 757 | 13 | 32 | $strand ||= 1 |
| 861 | 9 | 0 | 'IO::File'->new($path) || (return) |
| 1184 | 1 | 0 | $self->next_seq || undef |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 395 | 1 | 18 | 0 | $self->{'index_name'} ||= $self->_default_index_name($path) |
| 485 | 9 | 0 | 0 | $self->{'index_name'} ||= $self->_default_index_name($dir) |
| 526 | 10 | 0 | 0 | $self->{'index_name'} ||= $self->_default_index_name($file) |
| 553 | 0 | 1 | 0 | $self->{'index_name'} ||= "fileset_$digest.index" |
| 693 | 12 | 8 | 0 | $force_reindex || scalar @updated > 0 |
| 746 | 0 | 0 | 20 | defined $start || defined $stop || defined $strand |
| 755 | 36 | 7 | 2 | $stop ||= $self->length($id) || 0 |
| 756 | 36 | 7 | 2 | $start ||= $stop > 0 ? 1 : 0 |
| 1137 | 4 | 2 | 21 | $self->{'clean'} or $self->{'indexing'} |