| Bio/Seq/Meta.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 15 | 37 | 40.5 |
| line | l | !l | condition |
|---|---|---|---|
| 357 | 0 | 0 | $self->warn("Gap mismatch [$m/$s] in column [" . ($i + 1) . "] of [$name] meta data in seq [" . $self->id . ']') and $success = 0 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 240 | 194 | 0 | 1 | $nm and ref $nm eq 'HASH' |
| 321 | 65 | 8 | 0 | $self->force_flush and not defined $self->{'_meta'}{$name} |
| 357 | 0 | 0 | 0 | $s eq $Bio::Seq::Meta::META_GAP and $s ne $m |
| 451 | 0 | 0 | 8 | $start =~ /^[+]?\d+$/ and $start > 0 |
| 650 | 0 | 1 | 0 | $self->named_meta_length($m) > 0 and $self->length != $self->named_meta_length($m) |
| 706 | 0 | 0 | 1 | $start =~ /^[+]?\d+$/ and $start > 0 |
| 708 | 0 | 0 | 1 | $end =~ /^[+]?\d+$/ and $end > 0 |
| line | l | !l | condition |
|---|---|---|---|
| 448 | 7 | 1 | $start ||= 1 |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 303 | 73 | 0 | 0 | $name ||= $Bio::Seq::Meta::DEFAULT_NAME |
| 447 | 8 | 0 | 0 | $name ||= $Bio::Seq::Meta::DEFAULT_NAME |
| 455 | 1 | 2 | 0 | $end ||= $start + length($value) - 1 |
| 558 | 48 | 0 | 0 | $name ||= $Bio::Seq::Meta::DEFAULT_NAME |