| line |
true |
false |
branch |
|
160
|
0 |
1 |
unless defined $fmt |
|
184
|
21 |
0 |
if ($fmt == 0) |
|
185
|
21 |
0 |
if (/^\'(\S+)\'\=\=\'(\+|\-)(\S+)\'\s+
\((\d+)\s+(\d+)\s+(\d+)\s+(\d+)\)\s+
(\d+)/ox) { } |
|
192
|
1 |
20 |
if (not defined $lastquery) { } |
|
|
0 |
20 |
elsif ($lastquery ne $query) { } |
|
200
|
0 |
0 |
if defined $lasthit |
|
207
|
4 |
17 |
if (not defined $lasthit or $lasthit ne $hit) |
|
208
|
3 |
1 |
if defined $lasthit |
|
243
|
18 |
3 |
if ($strand eq '-') |
|
271
|
1 |
0 |
if (defined $lastquery and $fmt == 0) |
|
272
|
1 |
0 |
if defined $lasthit |
|
292
|
1 |
1 |
if @_ |
|
312
|
26 |
153 |
if (my $type = $Bio::SearchIO::megablast::MODEMAP{$nm}) |
|
314
|
26 |
0 |
if ($self->_eventHandler->will_handle($type)) |
|
321
|
1 |
178 |
if ($nm eq 'MegaBlastOutput') |
|
345
|
26 |
153 |
if (my $type = $Bio::SearchIO::megablast::MODEMAP{$nm}) { } |
|
|
153 |
0 |
elsif ($Bio::SearchIO::megablast::MAPPING{$nm}) { } |
|
346
|
26 |
0 |
if ($self->_eventHandler->will_handle($type)) |
|
354
|
0 |
153 |
if (ref($Bio::SearchIO::megablast::MAPPING{$nm}) =~ /hash/i) { } |
|
365
|
1 |
178 |
if $nm eq 'MegaBlastOutput' |
|
402
|
0 |
153 |
unless defined $data->{'Data'} |
|
420
|
26 |
0 |
if (defined $value) |
|
443
|
0 |
0 |
if not defined $name || defined $self->{'_elements'} or scalar @{$self->{'_elements'};} == 0 |
|
445
|
0 |
0 |
if ($_ eq $name) |
|
467
|
0 |
0 |
unless defined $self->{'_elements'}[0] |