| line |
true |
false |
branch |
|
95
|
0 |
2 |
unless $self->_initialize_io(@args) |
|
98
|
0 |
2 |
if $file =~ /^>/ |
|
100
|
0 |
2 |
if $buf =~ /^/ |
|
104
|
2 |
88 |
if ($buf =~ /DATABASE AND MOTIFS/) |
|
106
|
2 |
14 |
if ($buf =~ /DATABASE/) |
|
112
|
2 |
14 |
if ($buf =~ /MOTIFS/) |
|
120
|
1 |
1 |
if ($self->{'_msrctype'} ne $self->{'_dbtype'}) |
|
125
|
2 |
88 |
if ($buf =~ /MOTIF WIDTH BEST POSSIBLE MATCH/) |
|
128
|
2 |
8 |
unless $buf =~ /\w/ |
|
138
|
2 |
86 |
if ($buf =~ /section i:/i) |
|
144
|
0 |
2 |
unless (%instances) |
|
150
|
2 |
84 |
if ($buf =~ /section ii:/i) |
|
157
|
38 |
46 |
unless $buf =~ /\*{10,}/ or not $buf =~ /\w/ |
|
159
|
0 |
2 |
unless %instances |
|
160
|
0 |
2 |
unless grep /\s+MAST\s+version\s+3/, @header |
|
177
|
2 |
106 |
if $line =~ /^[\s\t*]/ |
|
180
|
0 |
106 |
if $line eq '' |
|
183
|
0 |
106 |
unless ($len) |
|
213
|
0 |
2 |
if $self->{'_end'} == 1 |
|
219
|
0 |
2 |
if ($line =~ /\*{10,}/) |
|
224
|
2 |
34 |
if (not $line =~ /^\s/) { } |
|
238
|
93 |
91 |
unless ($next =~ /\D/) |
|
239
|
2 |
91 |
unless @motifs |
|
244
|
90 |
1 |
$id =~ /\[/ ? : |
|
246
|
49 |
42 |
$id =~ /\-\d/ ? : |
|
247
|
87 |
4 |
if ($self->{'_mixquery'}) |
|
248
|
34 |
53 |
if $id =~ /\d+a/ |
|
249
|
25 |
62 |
if $id =~ /\d+b/ |
|
250
|
28 |
59 |
if $id =~ /\d+c/ |
|
268
|
87 |
4 |
if $self->{'_mixquery'} |
|
304
|
0 |
0 |
unless ($matrix->get_logs_array('A')) |