| line |
true |
false |
branch |
|
137
|
0 |
3 |
unless $header |
|
156
|
3 |
0 |
if $evalue_cutoff eq '[unset]' |
|
158
|
3 |
0 |
if $score_cutoff eq '[unset]' |
|
160
|
3 |
0 |
if $hsps_cutoff eq '[unset]' |
|
167
|
0 |
57 |
if $evalue_cutoff and $evalue > $evalue_cutoff |
|
168
|
0 |
57 |
if $score_cutoff and $3 < $score_cutoff |
|
169
|
0 |
57 |
if $hsps_cutoff and $5 < $hsps_cutoff |
|
173
|
3 |
0 |
@table > 0 ? : |
|
194
|
34 |
25 |
if ($7 eq ']') |
|
208
|
1 |
25 |
if $self->{'_no_more_alignments'} |
|
212
|
3 |
22 |
unless (defined $self->{'_after_previous_alignment'}) |
|
215
|
1 |
2 |
unless ($chunk) |
|
227
|
1 |
21 |
unless ($chunk) |
|
231
|
0 |
1 |
unless ($chunk) |
|
239
|
22 |
0 |
if (defined $self->{'_next_alignment_start_text'}) |
|
254
|
5 |
16 |
if $self->{'_next_hit_index'} == -1 |
|
262
|
5 |
11 |
if ($self->{'_next_hit_index'} > $#hit_table) |
|
317
|
3 |
0 |
@hits > 0 ? : |
|
367
|
0 |
2 |
unless @{$table_ref;} > 1 |
|
370
|
0 |
2 |
unless @sorted == @{$table_ref;} |
|
387
|
0 |
3 |
unless ($self->_fields->{'hit_table'}) |
|
390
|
3 |
0 |
@{$self->_fields->{'hit_table'};} > 0 ? : |