| lib/Bio/Roary/UniqueGenesPerSample.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 7 | 12 | 58.3 |
| line | true | false | branch |
|---|---|---|---|
| 16 | 0 | 1 | unless open my $fh, '>', $self->output_filename |
| 25 | 0 | 2 | unless open my $input_fh, $self->clustered_proteins |
| 32 | 0 | 12 | if length $line < 6 |
| 33 | 10 | 2 | if ($line =~ /^.+: ([^\s]+)$/) { } |
| 35 | 10 | 0 | if ($gene_id =~ /^(.+)_[\d]+$/) { } |
| 58 | 0 | 2 | unless $sample_to_gene_freq{$b} <=> $sample_to_gene_freq{$a} |