| lib/Bio/Roary/ParallelAllAgainstAllBlast.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 19 | 19 | 100.0 |
| pod | 0 | 2 | 0.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 6 | 3 | n/a | BEGIN |
| 7 | 3 | n/a | BEGIN |
| 8 | 3 | n/a | BEGIN |
| 9 | 3 | n/a | BEGIN |
| 10 | 3 | n/a | BEGIN |
| 11 | 3 | n/a | BEGIN |
| 12 | 3 | n/a | BEGIN |
| 13 | 3 | n/a | BEGIN |
| 36 | 3 | No | BUILD |
| 42 | 3 | n/a | _build__blast_database |
| 47 | 3 | n/a | _build__makeblastdb_obj |
| 55 | 3 | n/a | _build__chunk_fasta_file_obj |
| 60 | 3 | n/a | _build__sequence_file_names |
| 65 | 3 | n/a | _build__working_directory_name |
| 70 | 1 | n/a | _build_blast_results_file_name |
| 75 | 3 | n/a | _combine_blast_results |
| 93 | 3 | n/a | _build_memory_in_mb |
| 108 | 3 | No | run |
| 135 | 3 | n/a | BEGIN |