| lib/Bio/Roary/InflateClusters.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 6 | 14 | 42.8 |
| line | true | false | branch |
|---|---|---|---|
| 19 | 0 | 2 | unless open my $fh, '>', $self->output_file |
| 26 | 0 | 2 | unless open my $fh, $self->mcl_filename |
| 47 | 5 | 16 | if (defined $self->_clustered_genes->{$gene_name}) |
| 70 | 16 | 0 | unless defined $self->_clustered_genes->{$gene_name} |
| 74 | 0 | 2 | if (defined $self->cdhit_groups_filename) |
| 77 | 0 | 0 | unless open my $cdhit_fh, $self->cdhit_groups_filename |
| 82 | 0 | 0 | if (defined $line) |