| line |
true |
false |
branch |
|
16
|
1 |
5 |
unless open FH, '<', "$obofile" |
|
|
6 |
1 |
if ($obofile =~ /.obo$/) { } |
|
19
|
10 |
219 |
if $_ =~ /^\s*$/ |
|
20
|
4 |
215 |
if ($_ =~ /^namespace:\s+(\D+)/) { } |
|
|
5 |
210 |
elsif ($_ =~ /^name:\s+(.+)/) { } |
|
|
5 |
205 |
elsif ($_ =~ /^id:\s+(\D+\d+)/) { } |
|
|
5 |
200 |
elsif ($_ =~ /^is_a:\s+(\D+\d+)/) { } |
|
|
5 |
195 |
elsif ($_ =~ /^relationship: part_of\s+(\D+\d+)/) { } |
|
29
|
4 |
1 |
if (defined $namespace) { } |
|
37
|
4 |
1 |
if (defined $namespace) { } |
|
51
|
1 |
4 |
unless open FH, '<', $edgesfile |
|
53
|
1 |
8 |
if $_ =~ /^[!,#]|^\s*$/ |
|
56
|
6 |
2 |
if ($vals[0] eq $namespace) |
|
59
|
1 |
3 |
unless (exists $checker{$namespace}) |
|
68
|
1 |
4 |
unless open FH, '<', $edgesfile |
|
85
|
0 |
5 |
unless $deg{$b} <=> $deg{$a} |
|
90
|
3 |
1 |
if ($len % 2) { } |
|
112
|
2 |
8 |
if ($chdORpar ne 'parents' and $chdORpar ne 'children') |
|
113
|
2 |
6 |
unless open FH, '<', $edgesfile |
|
117
|
6 |
6 |
if ($chdORpar eq 'parents') { } |
|
132
|
2 |
4 |
if ($annfile =~ /.gz$/) { } |
|
133
|
1 |
1 |
unless open FH, '<:gzip', $annfile |
|
135
|
1 |
3 |
unless open FH, '<', "$annfile" |
|
138
|
3 |
24 |
if $_ =~ /^[!,#]|^\s*$/ |
|
162
|
1 |
7 |
unless open FH, '<', "$obofile" |
|
|
8 |
1 |
if ($obofile =~ /.obo$/) { } |
|
165
|
14 |
308 |
if $_ =~ /^\s*$/ |
|
166
|
7 |
301 |
if ($_ =~ /^id:\s+(\D+\d+)/) |
|
167
|
49 |
259 |
if ($_ =~ /^alt_id:\s+(\D+\d+)/) |
|
172
|
2 |
5 |
if ($annfile =~ /.gz$/) { } |
|
173
|
1 |
1 |
unless open FH, '<:gzip', $annfile |
|
175
|
1 |
4 |
unless open FH, '<', "$annfile" |
|
179
|
2 |
26 |
if ($_ =~ /^[!,#]|^\s*$/) |
|
180
|
2 |
26 |
if $_ =~ /^[!,#]|^\s*$/ |
|
189
|
8 |
27 |
if ($oldclass{$k}) { } |
|
197
|
8 |
27 |
if ($tmp ne 'unseen') |
|
202
|
1 |
4 |
if ($annfile =~ /.gz$/) { } |
|
203
|
0 |
1 |
unless open FH, '<:gzip', $annfile |
|
205
|
0 |
4 |
unless open FH, '<', "$annfile" |
|
209
|
2 |
26 |
if $_ =~ /^[!,#]|^\s*$/ |
|
212
|
16 |
10 |
if ($old2new{$oboterm}) { } |
|
221
|
1 |
4 |
if (defined $header) |
|
224
|
4 |
1 |
if (defined $pair) |