Subroutine Coverage

blib/lib/UMLS/Interface/CuiFinder.pm
Criterion Covered Total %
subroutine 11 105 10.4
pod 0 1 0.0


line count pod subroutine
43 24 n/a BEGIN
44 24 n/a BEGIN
45 24 n/a BEGIN
46 24 n/a BEGIN
47 24 n/a BEGIN
49 24 n/a BEGIN
142 22 No new
170 0 n/a _reConfig
189 22 n/a _initializeGlobalVariables
263 22 n/a _initialize
327 0 n/a _root
336 0 n/a _setCacheTable
371 0 n/a _setUpperLevelTaxonomy
419 0 n/a _createUpperLevelTaxonomy
532 0 n/a _createTaxonomyTables
583 0 n/a _loadTaxonomyTables
626 0 n/a _loadTaxonomyArrays
669 0 n/a _checkTableExists
712 0 n/a _connectIndexDB
758 0 n/a _getIndexDB
780 0 n/a _getDB
803 0 n/a _createIndexDB
846 0 n/a _getDUI
878 0 n/a _inCuiList
903 0 n/a _loadCuiList
932 0 n/a _setConfigFile
974 0 n/a _setConfigurationFile
1157 0 n/a _setEnvironmentVariable
1221 0 n/a _setRelations
1321 0 n/a _setSabDef
1399 0 n/a _setRelDef
1483 0 n/a _setSabUmlsAll
1516 0 n/a _setSabs
1598 0 n/a _setRelas
1784 0 n/a _setRelaDef
1948 0 n/a _config
2230 0 n/a _getSabString
2239 0 n/a _getRelString
2248 0 n/a _getRelaString
2257 0 n/a _getSabDefString
2266 0 n/a _getRelDefString
2278 0 n/a _setVersion
2310 0 n/a _checkTablesExist
2360 0 n/a _setOptions
2427 22 n/a _setDatabase
2498 0 n/a _getConfigParameters
2511 0 n/a _getCuis
2552 0 n/a _getSabCui
2593 0 n/a _disconnect
2613 0 n/a _version
2620 66 n/a _debug
2633 0 n/a _exists
2688 0 n/a _getRelated
2737 0 n/a _getAllPreferredTerm
2795 0 n/a _getPreferredTerm
2862 0 n/a _getTermList
2927 0 n/a _getDefTermList
2991 0 n/a _getTermSabList
3059 0 n/a _getAllTerms
3129 0 n/a _getConceptList
3177 0 n/a _getDefConceptList
3223 0 n/a _getAllConcepts
3260 0 n/a _getCompounds
3320 0 n/a _getCuiList
3376 0 n/a _getCuisFromSource
3398 0 n/a _getSab
3435 0 n/a _getChildRelations
3443 0 n/a _getParentRelations
3456 0 n/a _getChildren
3521 0 n/a _getParents
3586 0 n/a _getRelations
3632 0 n/a _getRelationsBetweenCuis
3698 0 n/a _forbiddenConcept
3747 0 n/a _getSt
3787 0 n/a _getStsFromSg
3832 0 n/a _getAllSts
3861 0 n/a _getSemanticRelation
3903 0 n/a _getStString
3938 0 n/a _getStAbr
3978 0 n/a _getStTui
4013 0 n/a _getStDef
4046 0 n/a _getSemanticGroup
4085 0 n/a _getAllSemanticGroups
4115 0 n/a _stGetSemanticGroup
4144 0 n/a _getSemanticGroupOfSt
4181 0 n/a _getExtendedRelated
4241 0 n/a _getExtendedDefinition
4389 0 n/a _getCuiDef
4447 0 n/a _returnTableNames
4472 0 n/a _setSemanticGroups
4646 0 n/a _dropConfigTable
4724 0 n/a _removeConfigFiles
4756 0 n/a _inParentTaxonomy
4787 0 n/a _inChildTaxonomy
4818 0 n/a _timeStamp
4834 0 n/a _printTime
4849 0 n/a _getTableFile
4856 0 n/a _getTableName
4862 0 n/a _getTableNameHuman
4866 0 n/a _getCacheTableName
4870 0 n/a _getCacheTableNameHuman
4874 0 n/a _getInfoTableName
4878 0 n/a _getInfoTableNameHuman
4882 0 n/a _getIntrinsicTableName
4886 0 n/a _getIntrinsicTableNameHuman