Condition Coverage

blib/lib/TIGR/HmmTools.pm
Criterion Covered Total %
condition 0 33 0.0


and 3 conditions

line !l l&&!r l&&r condition
201 0 0 0 $in_hit_scores and not $line =~ /^\s+--/
0 0 0 $in_hit_scores and not $line =~ /^\s+--/ and not $line =~ /inclusion_threshold/
0 0 0 $in_domain_scores and $line =~ /Alignments for each/
0 0 0 $in_domain_scores and not $line =~ /^\s*[>\#-]/
751 0 0 0 $data->{'hit'}{$hit}{'total_score'} >= $instructions->{'total_bit_cutoff'} and $data->{'hit'}{$hit}{'total_evalue'} <= $instructions->{'total_evalue_cutoff'}
758 0 0 0 $data->{'hit'}{$hit}{'domain'}{$domain}{'domain_score'} >= $instructions->{'domain_bit_cutoff'} and $data->{'hit'}{$hit}{'domain'}{$domain}{'domain_evalue'} <= $instructions->{'domain_evalue_cutoff'}

or 3 conditions

line l !l&&r !l&&!r condition
158 0 0 0 $line =~ /^\s*$/ or $line =~ /inclusion threshold/
239 0 0 0 $c[1] eq 'targets' or $c[1] eq 'reported'
0 0 0 $c[1] eq 'targets' or $c[1] eq 'reported' or $c[1] eq 'Fwd'
573 0 0 0 $lines[$i] =~ /Fr = ([\-\d]+)/ or $lines[$i] =~ /\. frame ([\-\d]+)/
851 0 0 0 $instructions->{'file_format'} eq 'fasta' or $instructions->{'file_format'} eq 'fa'