| line |
!l |
l&&!r |
l&&r |
condition |
|
80
|
0 |
0 |
0 |
defined $header and $header =~ s/^($UNBOUND_FASTA_SEPARATOR){0,1}(.*)/$UNBOUND_FASTA_SEPARATOR$2/ |
|
|
0 |
0 |
0 |
defined $header and $header =~ s/^($UNBOUND_FASTA_SEPARATOR){0,1}(.*)/$UNBOUND_FASTA_SEPARATOR$2/ and defined $data_rec |
|
|
0 |
0 |
0 |
defined $header and $header =~ s/^($UNBOUND_FASTA_SEPARATOR){0,1}(.*)/$UNBOUND_FASTA_SEPARATOR$2/ and defined $data_rec and defined($identifier = &_headerToIdentifier($header)) |
|
|
0 |
0 |
0 |
defined $header and $header =~ s/^($UNBOUND_FASTA_SEPARATOR){0,1}(.*)/$UNBOUND_FASTA_SEPARATOR$2/ and defined $data_rec and defined($identifier = &_headerToIdentifier($header)) and &isValidFASTAdata($data_rec) != 0 |
|
117
|
0 |
0 |
0 |
defined $other_obj and $self->toString eq $other_obj->toString |
|
207
|
0 |
0 |
0 |
defined($seg = substr($data_copy, 0, $$OUTPUT_LINE_LENGTH_REF, '')) and $seg ne '' |
|
232
|
0 |
0 |
0 |
defined $NA_strand and $validData = &_isNucleotideData($NA_strand) |
|
|
0 |
0 |
0 |
defined $NA_strand and $validData = &_isNucleotideData($NA_strand) and $validData == 1 |
|
268
|
0 |
0 |
0 |
defined $NA_strand and $validData = &_isNucleotideData($NA_strand) |
|
|
0 |
0 |
0 |
defined $NA_strand and $validData = &_isNucleotideData($NA_strand) and $validData == 1 |
|
312
|
0 |
0 |
0 |
defined $data_str and defined $startpos |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos and defined $length |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos and defined $length and abs $startpos < $strlen |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos and defined $length and abs $startpos < $strlen and abs $length <= $strlen |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos and not defined $length |
|
|
0 |
0 |
0 |
defined $data_str and defined $startpos and not defined $length and abs $startpos < $strlen |
|
343
|
0 |
0 |
0 |
defined $data_str and $data_str =~ /[-]+/ |