| line |
true |
false |
branch |
|
114
|
0 |
0 |
if ($valid_flag != 0 and scalar @data_lines > 0) |
|
126
|
0 |
0 |
if ($first_line_flag == 0) |
|
131
|
0 |
0 |
if (defined $first_len) |
|
133
|
0 |
0 |
if ($line_len_flag > 0 or $line_len_flag < 0 and $#data_lines != -1) |
|
162
|
0 |
0 |
if (defined $header and ($identifier) = $header =~ /$FASTA_HEADER_PARSE/) { } |
|
165
|
0 |
0 |
if (defined $identifier and not $identifier =~ m[/]) { } |
|
191
|
0 |
0 |
if ($data_definition =~ /^[$NA_IUPAC_CODES]+$/i or $data_definition =~ /^[$AA_IUPAC_CODES]+$/i) { } |
|
216
|
0 |
0 |
if (defined $line) |
|
219
|
0 |
0 |
if ($line_len > $RECORD_LINE_LENGTH) { } |
|
|
0 |
0 |
elsif ($line_len < $RECORD_LINE_LENGTH) { } |
|
246
|
0 |
0 |
if (defined $line) |
|
250
|
0 |
0 |
if ($line_len > 0) |
|
270
|
0 |
0 |
if (defined $data_def and $data_def =~ /^[$NA_IUPAC_CODES]+$/i) { } |
|
294
|
0 |
0 |
if (defined $data_def and $data_def =~ /^[$AA_IUPAC_CODES]+$/i) { } |
|
317
|
0 |
0 |
if (defined $header and ($identifier) = $header =~ /$FASTA_HEADER_PARSE/ and defined $identifier) { } |
|
320
|
0 |
0 |
if ($identifier =~ m[/]) { } |