Subroutine Coverage
| blib/lib/FASTX/Seq.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
34 |
36 |
94.4
|
| pod |
29 |
29 |
100.0
|
| line |
count |
pod |
subroutine |
|
4
|
46 |
n/a |
BEGIN |
|
5
|
46 |
n/a |
BEGIN |
|
6
|
46 |
n/a |
BEGIN |
|
7
|
46 |
n/a |
BEGIN |
|
9
|
46 |
n/a |
BEGIN |
|
22
|
81 |
Yes |
new |
|
87
|
10 |
Yes |
copy |
|
98
|
93 |
Yes |
seq |
|
107
|
14 |
Yes |
name |
|
116
|
56 |
Yes |
qual |
|
124
|
11 |
Yes |
comment |
|
132
|
29 |
Yes |
offset |
|
141
|
20 |
Yes |
line_len |
|
150
|
10 |
Yes |
default_quality |
|
159
|
23 |
Yes |
len |
|
169
|
2 |
Yes |
rev |
|
179
|
1 |
Yes |
rc |
|
193
|
7 |
Yes |
slice |
|
208
|
42 |
Yes |
char2qual |
|
217
|
2 |
Yes |
qual2char |
|
226
|
5 |
Yes |
qualities |
|
238
|
1 |
Yes |
min_qual |
|
248
|
1 |
Yes |
max_qual |
|
257
|
1 |
Yes |
trim_after |
|
277
|
1 |
Yes |
trim_until |
|
296
|
22 |
n/a |
_kmer2num |
|
317
|
5 |
Yes |
translate |
|
383
|
0 |
Yes |
string |
|
395
|
0 |
Yes |
as_string |
|
403
|
15 |
Yes |
asfasta |
|
413
|
25 |
Yes |
asfastq |
|
443
|
5 |
Yes |
as_fasta |
|
450
|
10 |
Yes |
as_fastq |
|
457
|
13 |
Yes |
is_fasta |
|
464
|
7 |
Yes |
is_fastq |
|
470
|
15 |
n/a |
_split_string |