Subroutine Coverage
| blib/lib/BioX/Wrapper/Annovar.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
8 |
24 |
33.3
|
| pod |
|
|
n/a
|
| line |
count |
pod |
subroutine |
|
5
|
1 |
n/a |
BEGIN |
|
6
|
1 |
n/a |
BEGIN |
|
7
|
1 |
n/a |
BEGIN |
|
8
|
1 |
n/a |
BEGIN |
|
9
|
1 |
n/a |
BEGIN |
|
10
|
1 |
n/a |
BEGIN |
|
11
|
1 |
n/a |
BEGIN |
|
12
|
1 |
n/a |
BEGIN |
|
415
|
0 |
n/a |
run |
|
432
|
0 |
n/a |
print_opts |
|
450
|
0 |
n/a |
check_files |
|
479
|
0 |
n/a |
find_vcfs |
|
499
|
0 |
n/a |
parse_commands |
|
528
|
0 |
n/a |
write_annovar |
|
580
|
0 |
n/a |
iter_vcfs |
|
605
|
0 |
n/a |
get_samples |
|
656
|
0 |
n/a |
convert_annovar |
|
667
|
0 |
n/a |
table_annovar |
|
687
|
0 |
n/a |
vcf_annotate |
|
723
|
0 |
n/a |
gen_descr |
|
745
|
0 |
n/a |
gen_annot |
|
792
|
0 |
n/a |
gen_cols |
|
822
|
0 |
n/a |
merge_vcfs |
|
852
|
0 |
n/a |
subset_vcfs |