| blib/lib/Bio/Tools/Run/StandAloneBlastPlus.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 9 | 44 | 20.4 |
| pod | 13 | 32 | 40.6 |
| line | count | pod | subroutine |
|---|---|---|---|
| 418 | 1 | n/a | BEGIN |
| 423 | 1 | n/a | BEGIN |
| 424 | 1 | n/a | BEGIN |
| 425 | 1 | n/a | BEGIN |
| 426 | 1 | n/a | BEGIN |
| 427 | 1 | n/a | BEGIN |
| 428 | 1 | n/a | BEGIN |
| 429 | 1 | n/a | BEGIN |
| 431 | 1 | n/a | BEGIN |
| 500 | 0 | Yes | new |
| 634 | 0 | Yes | db |
| 635 | 0 | No | db_name |
| 636 | 0 | No | set_db_name |
| 637 | 0 | No | db_dir |
| 638 | 0 | No | set_db_dir |
| 639 | 0 | No | db_path |
| 640 | 0 | No | db_data |
| 641 | 0 | No | set_db_data |
| 642 | 0 | No | db_type |
| 643 | 0 | No | masker |
| 644 | 0 | No | set_masker |
| 645 | 0 | No | mask_file |
| 646 | 0 | No | set_mask_file |
| 647 | 0 | No | mask_data |
| 648 | 0 | No | set_mask_data |
| 662 | 0 | Yes | factory |
| 663 | 0 | No | create |
| 664 | 0 | No | overwrite |
| 665 | 0 | No | is_remote |
| 689 | 0 | Yes | program_version |
| 695 | 0 | Yes | package_version |
| 717 | 0 | Yes | make_db |
| 799 | 0 | Yes | make_mask |
| 939 | 0 | Yes | db_info |
| 1033 | 0 | Yes | set_db_make_args |
| 1046 | 0 | No | db_make_args |
| 1060 | 0 | Yes | set_mask_make_args |
| 1073 | 0 | No | mask_make_args |
| 1090 | 0 | Yes | check_db |
| 1128 | 0 | Yes | no_throw_on_crash |
| 1149 | 0 | n/a | _fastize |
| 1267 | 0 | n/a | _register_temp_for_cleanup |
| 1289 | 0 | Yes | cleanup |
| 1349 | 0 | n/a | AUTOLOAD |