Branch Coverage

blib/lib/Bio/Tools/Run/StandAloneBlastPlus/BlastMethods.pm
Criterion Covered Total %
branch 0 46 0.0


line true false branch
223 0 0 unless ($method)
226 0 0 unless ($query)
229 0 0 unless ($outfile)
240 0 0 if ($outformat)
241 0 0 unless ($outformat =~ /^"?[0-9]{1,2}/)
248 0 0 if ($method_args)
249 0 0 if @$method_args % 2
260 0 0 unless $self->check_db or $self->is_remote or $usr_args{'-subject'} or $usr_args{'-SUBJECT'}
263 0 0 if (%usr_args)
267 0 0 unless (grep /^$key$/, @avail_parms)
278 0 0 if ($self->is_remote)
286 0 0 if (%usr_args)
291 0 0 if ($blast_args{'-db'} and $blast_args{'-subject'})
299 0 0 unless $status
302 0 0 if ($blast_args{'-subject'})
303 0 0 unless (_demodernize($outfile))
310 0 0 if (/^(t|psi|rps|rpst)?blast[npx]?/)
360 0 0 unless ($method)
363 0 0 unless ($query)
366 0 0 unless ($subject)
372 0 0 if ($method_args)
397 0 0 unless $self->{'_results'}
413 0 0 unless $self->blast_out