| line |
true |
false |
branch |
|
150
|
0 |
1 |
if $PROGRAM_DIR |
|
244
|
0 |
0 |
unless chdir $temp_dir |
|
248
|
0 |
0 |
if ($atomic) |
|
255
|
0 |
0 |
if ($exon_feats) |
|
261
|
0 |
0 |
$exon_feats ? : |
|
271
|
0 |
0 |
unless open my $efh, '<', $error_file |
|
275
|
0 |
0 |
if /not divisible by 3/ |
|
278
|
0 |
0 |
if $throw |
|
283
|
0 |
0 |
if system "generate_phyloMAX_score.pl $binomial_file > $phylo_file" |
|
289
|
0 |
0 |
if system "generate_mcs_beta.pl $offset $gtf $phylo_file > $mcs_file" |
|
296
|
0 |
0 |
if ($start_adjust) |
|
305
|
0 |
0 |
unless chdir $cwd |
|
327
|
0 |
0 |
$^O =~ /mswin/i ? : |
|
328
|
0 |
0 |
if $self->quiet |