| blib/lib/Bio/Tools/Run/Maq.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 11 | 22 | 50.0 |
| pod | 6 | 8 | 75.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 192 | 1 | n/a | BEGIN |
| 196 | 1 | n/a | BEGIN |
| 199 | 1 | n/a | BEGIN |
| 203 | 1 | n/a | BEGIN |
| 204 | 1 | n/a | BEGIN |
| 205 | 1 | n/a | BEGIN |
| 206 | 1 | n/a | BEGIN |
| 207 | 1 | n/a | BEGIN |
| 209 | 1 | n/a | BEGIN |
| 235 | 1 | Yes | new |
| 272 | 0 | Yes | run |
| 324 | 0 | Yes | run_maq |
| 414 | 0 | Yes | stdout |
| 433 | 0 | Yes | stderr |
| 450 | 0 | n/a | _check_sequence_input |
| 460 | 0 | n/a | _check_optional_quality_input |
| 471 | 0 | n/a | _prepare_input_sequences |
| 519 | 0 | n/a | _collate_subcmd_args |
| 560 | 0 | n/a | _run |
| 628 | 3 | Yes | available_parameters |
| 646 | 0 | No | available_commands |
| 648 | 0 | No | filespec |