Condition Coverage

blib/lib/Bio/Tools/Run/BWA.pm
Criterion Covered Total %
condition 0 17 0.0


and 3 conditions

line !l l&&!r l&&r condition
524 0 0 0 $rd1_file && $rd2_file

or 2 conditions

line l !l condition
483 0 0 $cmd ||= 'run'

or 3 conditions

line l !l&&r !l&&!r condition
343 0 0 0 defined $args{$_} or $self->throw("Required filearg '${_}' not specified")
348 0 0 0 open $out, '>', $args{$1} or $self->throw("Open for write error : $!")
352 0 0 0 open $err, '>', $args{$1} or $self->throw("Open for write error : $!")
356 0 0 0 open $in, '<', $args{$1} or $self->throw("Open for read error : $!")