Subroutine Coverage
| blib/lib/Bio/Tools/Run/Alignment/Lagan.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
14 |
22 |
63.6
|
| pod |
8 |
8 |
100.0
|
| line |
count |
pod |
subroutine |
|
139
|
1 |
n/a |
BEGIN |
|
140
|
1 |
n/a |
BEGIN |
|
141
|
1 |
n/a |
BEGIN |
|
142
|
1 |
n/a |
BEGIN |
|
143
|
1 |
n/a |
BEGIN |
|
144
|
1 |
n/a |
BEGIN |
|
145
|
1 |
n/a |
BEGIN |
|
146
|
1 |
n/a |
BEGIN |
|
147
|
1 |
n/a |
BEGIN |
|
149
|
1 |
n/a |
BEGIN |
|
165
|
1 |
Yes |
new |
|
191
|
0 |
Yes |
lagan |
|
215
|
0 |
Yes |
mlagan |
|
281
|
0 |
Yes |
nuc_matrix |
|
321
|
0 |
n/a |
_setinput |
|
403
|
0 |
n/a |
_generic_lagan |
|
421
|
0 |
n/a |
_setparams |
|
460
|
0 |
n/a |
_runlagan |
|
548
|
1 |
Yes |
executable |
|
590
|
1 |
Yes |
program_path |
|
612
|
1 |
Yes |
program_dir |
|
626
|
0 |
Yes |
version |