| blib/lib/Bio/Tools/Run/Alignment/Gmap.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 9 | 16 | 56.2 |
| pod | 8 | 8 | 100.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 90 | 1 | n/a | BEGIN |
| 91 | 1 | n/a | BEGIN |
| 95 | 1 | n/a | BEGIN |
| 96 | 1 | n/a | BEGIN |
| 100 | 1 | n/a | BEGIN |
| 114 | 1 | Yes | new |
| 135 | 0 | Yes | version |
| 167 | 6 | Yes | program_name |
| 186 | 3 | Yes | program_dir |
| 205 | 0 | Yes | input_file |
| 224 | 0 | Yes | genome_db |
| 242 | 0 | Yes | flags |
| 261 | 0 | Yes | run |
| 281 | 1 | n/a | BEGIN |
| 284 | 0 | n/a | _build_fasta_input_file |
| 325 | 0 | n/a | _run |