| line |
!l |
l&&!r |
l&&r |
condition |
|
157
|
0 |
0 |
0 |
-e $f and -x $f |
|
263
|
0 |
0 |
0 |
$Bio::Tools::Run::Vista::PROGRAM and -e $Bio::Tools::Run::Vista::PROGRAM |
|
|
0 |
0 |
0 |
$Bio::Tools::Run::Vista::PROGRAM and -e $Bio::Tools::Run::Vista::PROGRAM and -x $Bio::Tools::Run::Vista::PROGRAM |
|
267
|
0 |
0 |
0 |
$exe = $self->io->exists_exe($Bio::Tools::Run::Vista::PROGRAMNAME) and -x $exe |
|
356
|
0 |
0 |
0 |
$sim and $sim->isa('Bio::Align::AlignI') |
|
406
|
0 |
0 |
0 |
$ref[$index] eq '-' and $seq2[$index] eq '-' |
|
430
|
0 |
0 |
0 |
$first[$index] eq '-' and $sec[$index] eq '-' |
|
481
|
0 |
0 |
0 |
ref $self->annotation eq 'ARRAY' and $self->annotation->[0]->isa('Bio::SeqFeatureI') |