| line |
true |
false |
branch |
|
170
|
0 |
3 |
if $ENV{'REPEATMASKERDIR'} |
|
179
|
0 |
3 |
unless $Bio::Tools::Run::RepeatMasker::OK_FIELD{$attr} |
|
180
|
3 |
0 |
if @_ |
|
203
|
1 |
3 |
if $attr =~ /^-/ |
|
228
|
0 |
0 |
if defined $self->{'_version'} |
|
230
|
0 |
0 |
unless $exe |
|
232
|
0 |
0 |
if ($string =~ /\(([\d.]+)\)/ or $string =~ /RepeatMasker\s+version\s+(\S+)/) { } |
|
301
|
0 |
0 |
if ($self->quiet or $self->verbose <= 0) |
|
302
|
0 |
0 |
$^O =~ /mswin/i ? : |
|
306
|
0 |
0 |
unless $status == 0 |
|
308
|
0 |
0 |
unless (open RM, $outfile) |
|
339
|
0 |
0 |
if ($seq) |
|
358
|
0 |
0 |
if ($rf) |
|
383
|
0 |
0 |
unless defined $value |
|
393
|
0 |
0 |
unless $value |
|
417
|
0 |
0 |
unless $seq->isa('Bio::PrimarySeqI') |