| Bio/Tools/HMMER/Results.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 18 | 29 | 62.0 |
| pod | 16 | 22 | 72.7 |
| line | count | pod | subroutine |
|---|---|---|---|
| 99 | 1 | n/a | BEGIN |
| 101 | 1 | n/a | BEGIN |
| 102 | 1 | n/a | BEGIN |
| 103 | 1 | n/a | BEGIN |
| 105 | 1 | n/a | BEGIN |
| 108 | 5 | Yes | new |
| 150 | 0 | Yes | next_feature |
| 180 | 4 | Yes | number |
| 203 | 6 | Yes | seqfile |
| 224 | 6 | Yes | hmmfile |
| 243 | 3037 | Yes | add_Domain |
| 270 | 0 | Yes | each_Domain |
| 299 | 0 | Yes | domain_bits_cutoff_from_evalue |
| 339 | 0 | No | dictate_hmm_acc |
| 361 | 0 | Yes | write_FT_output |
| 393 | 1 | Yes | filter_on_cutoff |
| 431 | 0 | Yes | write_ascii_out |
| 462 | 0 | Yes | write_GDF_bits |
| 509 | 0 | No | write_scores_bits |
| 550 | 0 | No | write_GDF |
| 566 | 0 | No | highest_noise |
| 593 | 0 | No | lowest_true |
| 642 | 1807 | Yes | add_Set |
| 667 | 3 | Yes | each_Set |
| 690 | 3 | Yes | get_Set |
| 709 | 2 | n/a | _parse_hmmpfam |
| 832 | 3 | No | get_unit_nse |
| 868 | 2 | n/a | _parse_hmmsearch |
| 966 | 6 | Yes | parsetype |