| line |
true |
false |
branch |
|
98
|
10 |
12 |
if ($seq) |
|
107
|
22 |
0 |
if $tfh |
|
108
|
22 |
0 |
if $file |
|
110
|
10 |
12 |
if $seq |
|
130
|
5649 |
8536 |
if (defined $value) |
|
133
|
14185 |
0 |
defined $obj->{'length'} ? : |
|
150
|
11 |
18 |
if (defined $data) |
|
151
|
11 |
0 |
if ($self->length == 0) { } |
|
177
|
3 |
2856 |
if (ref $start and $start->isa('Bio::LocationI')) |
|
179
|
0 |
3 |
if ($loc->length == 0) { } |
|
|
0 |
3 |
elsif ($loc->end < $loc->start) { } |
|
187
|
1 |
2 |
if ($loc->isa('Bio::Location::SplitLocationI')) { } |
|
189
|
0 |
2 |
unless (seek $fh, $subloc->start - 1, 0) |
|
193
|
0 |
2 |
unless (defined $ret) |
|
196
|
1 |
1 |
if ($subloc->strand < 0) |
|
202
|
0 |
2 |
unless (seek $fh, $loc->start - 1, 0) |
|
207
|
0 |
2 |
unless (defined $ret) |
|
213
|
0 |
3 |
if (defined $loc->strand and $loc->strand < 0) |
|
219
|
0 |
2856 |
if ($start <= 0 or $end > $self->length) |
|
223
|
0 |
2856 |
if ($end < $start) |
|
227
|
0 |
2856 |
unless (seek $fh, $start - 1, 0) |
|
231
|
0 |
2856 |
unless (defined $ret) |
|
253
|
0 |
5635 |
unless (seek $fh, 0, 2) |
|
275
|
14 |
45 |
if (defined $value) |
|
297
|
14 |
15 |
if (defined $value) |
|
307
|
22 |
5 |
if defined $fh |
|
309
|
14 |
13 |
if defined $self->_filename and -e $self->_filename |
|
311
|
22 |
5 |
if defined $self->{'tempdir'} and -e $self->{'tempdir'} |