| line |
true |
false |
branch |
|
143
|
1 |
2 |
if ($a =~ /FILE|FH/i) |
|
157
|
0 |
1 |
if ($fh) { } |
|
|
1 |
0 |
elsif ($file) { } |
|
163
|
1 |
0 |
if ($wisetype =~ /genewise/i) { } |
|
|
0 |
0 |
elsif ($wisetype =~ /genomewise/i) { } |
|
189
|
0 |
1 |
unless $self->wise |
|
191
|
0 |
1 |
unless $prediction |
|
205
|
1 |
0 |
if ($exons[0]->has_tag('supporting_feature')) |
|
215
|
0 |
18 |
if ($exon->strand < 0) { } |
|
228
|
18 |
0 |
if ($exon->has_tag('supporting_feature')) |
|
231
|
0 |
18 |
if ($protein->strand < 0) { } |
|
272
|
20 |
130 |
if ($type) |
|
273
|
20 |
0 |
if ($self->_eventHandler->will_handle($type)) |
|
279
|
1 |
19 |
if ($type eq 'result') |
|
304
|
20 |
130 |
if ($type = $Bio::SearchIO::wise::MODEMAP{$nm}) { } |
|
|
130 |
0 |
elsif ($Bio::SearchIO::wise::MAPPING{$nm}) { } |
|
305
|
20 |
0 |
if ($self->_eventHandler->will_handle($type)) |
|
314
|
0 |
130 |
if (ref($Bio::SearchIO::wise::MAPPING{$nm}) =~ /hash/i) { } |
|
325
|
1 |
149 |
if defined $type and $type eq 'result' |
|
361
|
0 |
130 |
unless defined $data->{'Data'} and not $data->{'Data'} =~ /^\s+$/ |
|
383
|
0 |
0 |
if not defined $name || defined $self->{'_elements'} or scalar @{$self->{'_elements'};} == 0 |
|
385
|
0 |
0 |
if ($_ eq $name) |
|
408
|
0 |
0 |
unless defined $self->{'_elements'}[0] |
|
453
|
0 |
0 |
unless (defined $self->writer) |
|
481
|
1 |
23 |
if @_ |
|
499
|
1 |
2 |
if @_ |