| Bio/PopGen/Utilities.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 10 | 18 | 55.5 |
| line | true | false | branch |
|---|---|---|---|
| 167 | 0 | 3 | unless (defined $aln) |
| 172 | 0 | 3 | unless ($aln->is_flush) |
| 176 | 3 | 0 | unless defined $phase |
| 177 | 0 | 0 | if ($phase != 0 and $phase != 1 and $phase != 2) |
| 183 | 1 | 2 | if (not defined $sitemodel or $sitemodel =~ /all/i) { } |
| 2 | 0 | elsif ($sitemodel =~ /cod(on)?/i) { } | |
| 201 | 181 | 1481 | if (keys %set > 1 or $includefixed) |
| 225 | 0 | 5250 | if (length $site < 3) |
| 242 | 812 | 0 | if (keys %set > 1 or $includefixed) |