| Bio/OntologyIO/obo.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 37 | 37 | 100.0 |
| pod | 4 | 4 | 100.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 114 | 1 | n/a | BEGIN |
| 116 | 1 | n/a | BEGIN |
| 117 | 1 | n/a | BEGIN |
| 118 | 1 | n/a | BEGIN |
| 119 | 1 | n/a | BEGIN |
| 120 | 1 | n/a | BEGIN |
| 121 | 1 | n/a | BEGIN |
| 122 | 1 | n/a | BEGIN |
| 124 | 1 | n/a | BEGIN |
| 125 | 1 | n/a | BEGIN |
| 127 | 1 | n/a | BEGIN |
| 155 | 3 | n/a | _initialize |
| 187 | 6 | Yes | ontology_name |
| 210 | 3 | Yes | parse |
| 335 | 6 | Yes | next_ontology |
| 372 | 3 | Yes | close |
| 381 | 5 | n/a | _add_ontology |
| 395 | 1184 | n/a | _add_term |
| 402 | 3 | n/a | _part_of_relationship |
| 409 | 993 | n/a | _is_a_relationship |
| 416 | 3 | n/a | _related_to_relationship |
| 423 | 3 | n/a | _regulates_relationship |
| 430 | 3 | n/a | _positively_regulates_relationship |
| 437 | 3 | n/a | _negatively_regulates_relationship |
| 444 | 1231 | n/a | _add_relationship |
| 452 | 2252 | n/a | _has_term |
| 459 | 6136 | n/a | _ont_engine |
| 470 | 6614 | n/a | _filter_line |
| 494 | 3 | n/a | _header |
| 567 | 1024 | n/a | _next_term |
| 710 | 2252 | n/a | _create_term_object |
| 716 | 4444 | n/a | _extract_quals |
| 744 | 575 | n/a | _extract_qstr |
| 778 | 479 | n/a | _split_on_comma |
| 793 | 4551 | n/a | _check_colon |
| 803 | 241 | n/a | _handle_relationship_tag |
| 812 | 575 | n/a | _to_annotation |