Condition Coverage

Bio/SeqIO/fastq.pm
Criterion Covered Total %
condition 33 39 84.6


and 3 conditions

line !l l&&!r l&&r condition
80 747 773 388 $mode eq '-seq' and $line =~ /^@([^\n]+)$/mosx
747 389 384 $mode eq '-seq' and $line =~ /^\+([^\n]*)/mosx
94 28 354 2 $desc and $$data{-'descriptor'} ne $desc
100 389 381 366 $mode eq '-raw_quality' and defined $$data{-'raw_quality'}
770 14 352 $mode eq '-raw_quality' and defined $$data{-'raw_quality'} and length $$data{-'raw_quality'} >= length $$data{-'seq'}
120 2 384 0 $$data{-'seq'} and defined $$data{-'raw_quality'}
132 0 69667 9 $self->{'_validate_qual'} and not exists $self->{'chr2qual'}{$_}
171 6 2 1 $ns eq 'solexa' && $var eq 'solexa'
175 181 270 92 $var ne 'solexa' and $ns eq 'solexa'
194 0 7 2 $self->{'_validate_qual'} and %bad_qual

or 2 conditions

line l !l condition
34 55 4 $variant ||= 'sanger'
156 9 0 $seq->seq || ''
276 0 0 $self->{'_quality_header'} || 0

or 3 conditions

line l !l&&r !l&&!r condition
74 340 48 14 $self->{'lastline'} || <$fh>