Subroutine Coverage
| Bio/SeqFeature/Generic.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
39 |
44 |
88.6
|
| pod |
29 |
34 |
85.2
|
| line |
count |
pod |
subroutine |
|
143
|
146 |
n/a |
BEGIN |
|
145
|
146 |
n/a |
BEGIN |
|
146
|
146 |
n/a |
BEGIN |
|
147
|
146 |
n/a |
BEGIN |
|
148
|
146 |
n/a |
BEGIN |
|
151
|
146 |
n/a |
BEGIN |
|
154
|
41010 |
Yes |
new |
|
197
|
45940 |
Yes |
set_attributes |
|
267
|
9798 |
Yes |
direct_new |
|
288
|
611860 |
Yes |
location |
|
317
|
195861 |
Yes |
start |
|
370
|
195356 |
Yes |
end |
|
423
|
2679 |
Yes |
length |
|
448
|
145867 |
Yes |
strand |
|
465
|
5975 |
Yes |
score |
|
499
|
2794 |
Yes |
frame |
|
527
|
133115 |
Yes |
primary_tag |
|
546
|
69452 |
Yes |
source_tag |
|
564
|
63550 |
Yes |
has_tag |
|
579
|
116066 |
Yes |
add_tag_value |
|
598
|
60647 |
Yes |
get_tag_values |
|
624
|
19046 |
Yes |
get_all_tags |
|
640
|
19 |
Yes |
remove_tag |
|
665
|
17234 |
Yes |
attach_seq |
|
696
|
239 |
Yes |
seq |
|
753
|
756 |
Yes |
entire_seq |
|
775
|
79321 |
Yes |
seq_id |
|
793
|
322 |
Yes |
display_name |
|
815
|
2950 |
Yes |
annotation |
|
844
|
30451 |
Yes |
get_SeqFeatures |
|
872
|
23287 |
Yes |
add_SeqFeature |
|
911
|
48 |
Yes |
remove_SeqFeatures |
|
940
|
1 |
Yes |
gff_format |
|
969
|
8 |
Yes |
gff_string |
|
992
|
0 |
Yes |
slurp_gff_file |
|
1029
|
0 |
n/a |
_from_gff_string |
|
1049
|
19497 |
n/a |
_expand_region |
|
1080
|
0 |
n/a |
_parse |
|
1097
|
11184 |
n/a |
_tag_value |
|
1114
|
0 |
No |
seqname |
|
1120
|
0 |
No |
display_id |
|
1126
|
280 |
No |
each_tag_value |
|
1127
|
91 |
No |
all_tags |
|
1138
|
41057 |
No |
cleanup_generic |