Condition Coverage

Bio/SearchIO/infernal.pm
Criterion Covered Total %
condition 77 118 65.2


and 3 conditions

line !l l&&!r l&&r condition
313 33 0 3 $buffer =~ s/^Accession:\s+// and not $accession
31 0 2 $buffer =~ s/^Description:\s+// and not $description
470 105 21 27 $ct % 6 == 0 and $buffer =~ /^$/
609 0 62 7 defined $type and $type eq 'result'
664 13 62 8 defined $type and $type eq 'result'
700 0 124 0 $data and ref $data
702 19 688 8 $data->{$nm} and $data->{$nm} =~ /^\s*$/o
729 0 0 13 defined $data->{'Data'} and not $data->{'Data'} =~ /^\s+$/o
750 0 0 43 defined $name && defined $self->{'_elements'}
1096 0 0 3 $lasteval and $lastpval
1193 0 0 3 $lasteval and $lastpval
1201 0 0 1 $self->within_element('result') and $seentop
1275 0 0 15 $lasteval and $lastpval
1361 0 0 15 $lasteval and $lastpval
1369 0 0 1 $self->within_element('result') and $seentop
1508 0 0 2 $self->within_element('result') and $seentop

or 2 conditions

line l !l condition
231 1 6 $symbols ||= \%STRUCTURE_SYMBOLS
533 15 0 $modelcounter{$hit_name . $hit_counter} || 0

or 3 conditions

line l !l&&r !l&&!r condition
229 2 5 0 $version ||= $DEFAULT_VERSION
233 2 0 5 $cutoff ||= $MINSCORE
235 0 7 0 $algorithm ||= $DEFAULT_ALGORITHM
299 0 1 4 not defined $buffer or $buffer =~ /^\[ok/
365 4 5 25 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /\-\-\-/
9 9 16 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /\-\-\-/ or $buffer =~ /^$/
14 1 15 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /\-\-\-/ or $buffer =~ /^$/ or $buffer =~ /No hits detected/
411 0 15 60 $buffer =~ /^Internal CM pipeline statistics/ or $buffer =~ /NC$/
15 0 60 $buffer =~ /^Internal CM pipeline statistics/ or $buffer =~ /NC$/ or $buffer =~ /^\>\>/
15 15 30 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /^\s----/
30 15 15 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /^\s----/ or $buffer =~ /^$/
30 0 15 $buffer =~ /^\s+rank\s+E-value/ or $buffer =~ /^\s----/ or $buffer =~ /^$/ or $buffer =~ /No hits detected/
470 12 3 153 $buffer =~ /^>>\s/ or $buffer =~ /^Internal CM pipeline statistics/
750 0 3 40 not defined $name && defined $self->{'_elements'} or scalar @{$self->{'_elements'};} == 0
1095 2 1 0 $maxscore ||= $lastscore
1097 2 1 0 $mineval ||= $lasteval
1098 2 1 0 $minpval ||= $lastpval
1274 12 3 0 $maxscore ||= $lastscore
1276 12 3 0 $mineval ||= $lasteval
1277 12 3 0 $minpval ||= $lastpval
1411 0 2 4 $line =~ /^memory/msx or $line =~ /^CYK\smemory/msx
1467 0 26 208 not defined $line or $line =~ /^\S+/