Subroutine Coverage
| Bio/Matrix/PSM/ProtMatrix.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
16 |
25 |
64.0
|
| pod |
18 |
18 |
100.0
|
| line |
count |
pod |
subroutine |
|
190
|
2 |
n/a |
BEGIN |
|
192
|
2 |
n/a |
BEGIN |
|
219
|
2 |
Yes |
new |
|
272
|
0 |
Yes |
alphabet |
|
293
|
2 |
n/a |
_calculate_consensus |
|
341
|
1 |
Yes |
next_pos |
|
384
|
2 |
Yes |
curpos |
|
403
|
2 |
Yes |
e_val |
|
422
|
0 |
Yes |
IC |
|
441
|
0 |
Yes |
accession_number |
|
459
|
3 |
Yes |
consensus |
|
472
|
2 |
Yes |
IUPAC |
|
491
|
1 |
Yes |
get_string |
|
524
|
4 |
Yes |
width |
|
542
|
1 |
Yes |
get_array |
|
564
|
0 |
Yes |
get_logs_array |
|
585
|
0 |
Yes |
id |
|
605
|
1 |
Yes |
regexp |
|
649
|
0 |
Yes |
regexp_array |
|
670
|
0 |
n/a |
_compress_array |
|
702
|
0 |
n/a |
_uncompress_string |
|
732
|
0 |
Yes |
get_compressed_freq |
|
774
|
1 |
Yes |
sequence_match_weight |
|
807
|
515 |
n/a |
_to_IUPAC |
|
839
|
515 |
n/a |
_to_cons |