lib/Bio/Tradis/FilterTags.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
branch | 17 | 18 | 94.4 |
line | true | false | branch |
---|---|---|---|
36 | 2 | 10 | if ($fq =~ /\.gz/) { } |
48 | 1 | 5 | if ($self->_is_gz) { } |
52 | 1 | 0 | unless (-e $newfq) |
81 | 81 | 13 | if ($self->mismatch == 0) { } |
82 | 54 | 27 | if ($seq_string =~ /^$tag/) |
88 | 10 | 3 | if ($mm <= $self->mismatch) |
93 | 64 | 30 | if ($print_out) |
99 | 1 | 5 | if ($self->_is_gz) |
115 | 26 | 91 | if ($tag[$i] ne $seq[$i]) |