blib/lib/Bio/Tools/Run/Alignment/Clustalw.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 0 | 35 | 0.0 |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
118 | 0 | 0 | 0 | $infilename1 and $infilename2 |
119 | 0 | 0 | 0 | -e $infilename1 and -e $infilename2 |
138 | 0 | 0 | 0 | $infilename1 and $infilename2 |
139 | 0 | 0 | 0 | -e $infilename1 and -e $infilename2 |
363 | 0 | 0 | 0 | ref $input and $input->isa('Bio::PrimarySeqI') |
0 | 0 | 0 | ref $input and $input->isa('Bio::PrimarySeqI') and $suffix == 2 | |
372 | 0 | 0 | 0 | defined $seq and $seq->isa('Bio::PrimarySeqI') |
0 | 0 | 0 | defined $seq and $seq->isa('Bio::PrimarySeqI') and $seq->id |
line | l | !l | condition |
---|---|---|---|
70 | 0 | 0 | $1 || undef |
179 | 0 | 0 | $slice_size ||= 5 |
180 | 0 | 0 | $deviate ||= 33 |
269 | 0 | 0 | $self->output || 'gcg' |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
219 | 0 | 0 | 0 | $self->quiet || $self->verbose < 0 |