Subroutine Coverage
| blib/lib/Bio/ToolBox/SeqFeature.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
28 |
37 |
75.6
|
| pod |
31 |
32 |
96.8
|
| line |
count |
pod |
subroutine |
|
408
|
2 |
n/a |
BEGIN |
|
409
|
2 |
n/a |
BEGIN |
|
423
|
2 |
n/a |
BEGIN |
|
445
|
1658 |
Yes |
new |
|
508
|
1671 |
Yes |
seq_id |
|
516
|
6485 |
Yes |
start |
|
524
|
2362 |
Yes |
end |
|
532
|
4245 |
Yes |
strand |
|
555
|
2189 |
Yes |
display_name |
|
563
|
2011 |
Yes |
primary_id |
|
575
|
9333 |
Yes |
primary_tag |
|
584
|
1925 |
Yes |
source_tag |
|
592
|
1901 |
Yes |
type |
|
613
|
119 |
Yes |
score |
|
621
|
420 |
Yes |
phase |
|
633
|
471 |
Yes |
duplicate |
|
649
|
773 |
Yes |
add_SeqFeature |
|
668
|
1215 |
Yes |
get_SeqFeatures |
|
678
|
0 |
Yes |
delete_SeqFeature |
|
698
|
518 |
Yes |
add_tag_value |
|
716
|
516 |
Yes |
has_tag |
|
722
|
425 |
Yes |
get_tag_values |
|
738
|
1 |
Yes |
attributes |
|
744
|
49 |
Yes |
all_tags |
|
751
|
0 |
Yes |
remove_tag |
|
764
|
232 |
Yes |
length |
|
769
|
0 |
Yes |
overlaps |
|
779
|
0 |
Yes |
contains |
|
789
|
0 |
Yes |
equals |
|
799
|
0 |
Yes |
intersection |
|
824
|
0 |
Yes |
union |
|
849
|
0 |
Yes |
subtract |
|
885
|
2 |
No |
version |
|
894
|
101 |
Yes |
gff_string |
|
970
|
224 |
n/a |
_encode |
|
976
|
99 |
n/a |
_spelunk |
|
984
|
0 |
Yes |
bed_string |