| line |
true |
false |
branch |
|
68
|
823 |
176 |
unless defined $group_name
|
|
70
|
0 |
176 |
if ($contigs_to_ids_obj->overlapping_hypothetical_protein_ids->{$gene_id})
|
|
97
|
11 |
120 |
if (defined $self->sample_weights and $self->sample_weights->{$sample_name}) { }
|
|
105
|
6 |
183 |
if (@{$groups_on_contig;} == 1)
|
|
108
|
0 |
6 |
if (defined $self->sample_weights and $self->sample_weights->{$sample_name}) { }
|
|
159
|
11 |
86 |
unless defined $groups{$group_to}
|
|
167
|
11 |
96 |
if (defined $sample_names)
|
|
175
|
6 |
23 |
if (@{$graph_group;} == 1) { }
|
|
190
|
84 |
7 |
if ($groups{$group_to})
|
|
218
|
72 |
1 |
unless (defined $self->samples_to_clusters)
|
|
229
|
6 |
0 |
if (defined $self->samples_to_clusters->{$sample_name})
|
|
233
|
0 |
0 |
unless $cluster_count{$b} <=> $cluster_count{$a}
|
|
234
|
0 |
3 |
unless (defined $largest_cluster)
|
|
311
|
2 |
76 |
if (@{$contig_groups;} <= 2) { }
|
|
|
0 |
76 |
elsif ($self->_groups_qc->{$group_name}) { }
|
|
330
|
29 |
0 |
if (not defined $groups_to_contigs{$group_name}{'comment'} or defined $groups_to_contigs{$group_name}{'comment'} and $groups_to_contigs{$group_name}{'comment'} eq '')
|
|
360
|
39 |
26 |
if $group_freq{$current_group} >= $self->number_of_files * $self->core_definition
|
|
363
|
11 |
15 |
if ($group_freq{$group_to} >= $self->number_of_files * $self->core_definition) { }
|