| line |
true |
false |
branch |
|
78
|
0 |
0 |
unless $self->has_ifile
|
|
84
|
0 |
0 |
unless ($self->has_odir)
|
|
85
|
0 |
0 |
unless ($self->has_dirnam)
|
|
89
|
0 |
0 |
if @$err
|
|
93
|
0 |
0 |
if ($self->has_dump_flag)
|
|
107
|
0 |
0 |
if ($self->next_aln->num_sequences == 2)
|
|
115
|
0 |
0 |
unless defined $token
|
|
120
|
0 |
0 |
unless (defined $alipathsegment)
|
|
126
|
0 |
0 |
unless open my $oinfo, '>', $oinfofile
|
|
162
|
0 |
0 |
unless open my $seqfile, '>', $oseqfile
|
|
175
|
0 |
0 |
if $self->next_aln->num_sequences != 2
|
|
182
|
0 |
0 |
unless $alnN->map_chars('-', 'N') == 1
|
|
186
|
0 |
0 |
unless length $seq1 == length $seq2
|