| line |
true |
false |
branch |
|
67
|
5 |
0 |
if (my $otuset = $self->get_otuset) { } |
|
|
0 |
0 |
elsif (my $dimensions = $self->get_dimensions) { } |
|
107
|
0 |
0 |
if (my $dimensions = $self->get_dimensions) { } |
|
138
|
180 |
13 |
if ($format_tokens[1] and $format_tokens[1] eq '=') { } |
|
139
|
0 |
180 |
if (lc $format_tokens[0] eq 'items') { } |
|
143
|
0 |
0 |
if ($val eq '(') |
|
192
|
2 |
69 |
unless ($block_type =~ qr/^(?:characters|unaligned)$/i) |
|
199
|
0 |
69 |
if ($$format{'datatype'} =~ /^continuous$/i) |
|
200
|
0 |
0 |
if ($$format{'notokens'}) |
|
209
|
52 |
17 |
if ($$format{'datatype'} =~ /^(?:dna|rna|nucleotide|protein|continuous)$/i) { } |
|
|
17 |
0 |
elsif ($$format{'datatype'} eq 'standard') { } |
|
213
|
17 |
0 |
unless ($$format{'respectcase'}) |
|
215
|
13 |
55 |
if defined $$format{$sub_cmd} |
|
257
|
6 |
75 |
$attribute ? : |
|
279
|
0 |
0 |
unless (defined do {
/$new_label/
}->first(@$current_taxlabels)) |
|
307
|
0 |
2 |
unless defined $nchar |
|
310
|
2 |
0 |
$nchar ? : |
|
314
|
0 |
2 |
if ($self->get_type eq 'characters' and not $nchar) |
|
342
|
2 |
0 |
if (scalar keys %format_of) |
|
345
|
2 |
0 |
if defined $format_of{'datatype'} |
|
347
|
0 |
2 |
if $format_of{'respectcase'} |
|
350
|
0 |
6 |
if lc $key eq 'interleave' |
|
351
|
2 |
4 |
if (not $val or $key =~ /(?:datatype|respectcase)/i) { } |
|
|
0 |
4 |
elsif ($val eq '1') { } |
|
365
|
0 |
0 |
if $Bio::NEXUS::Matrix::AUTOLOAD =~ /DESTROY$/ |
|
375
|
0 |
0 |
if (defined $synonym_for{$Bio::NEXUS::Matrix::AUTOLOAD}) { } |