| line |
count |
pod |
subroutine |
|
6
|
17 |
n/a |
BEGIN |
|
7
|
17 |
n/a |
BEGIN |
|
9
|
17 |
n/a |
BEGIN |
|
10
|
17 |
n/a |
BEGIN |
|
12
|
17 |
n/a |
BEGIN |
|
14
|
17 |
n/a |
BEGIN |
|
17
|
17 |
n/a |
BEGIN |
|
19
|
17 |
n/a |
BEGIN |
|
20
|
17 |
n/a |
BEGIN |
|
21
|
17 |
n/a |
BEGIN |
|
22
|
17 |
n/a |
BEGIN |
|
23
|
17 |
n/a |
BEGIN |
|
24
|
17 |
n/a |
BEGIN |
|
25
|
17 |
n/a |
BEGIN |
|
26
|
17 |
n/a |
BEGIN |
|
27
|
17 |
n/a |
BEGIN |
|
28
|
17 |
n/a |
BEGIN |
|
29
|
17 |
n/a |
BEGIN |
|
30
|
17 |
n/a |
BEGIN |
|
31
|
17 |
n/a |
BEGIN |
|
33
|
17 |
n/a |
BEGIN |
|
34
|
17 |
n/a |
BEGIN |
|
36
|
17 |
n/a |
BEGIN |
|
37
|
17 |
n/a |
BEGIN |
|
38
|
17 |
n/a |
BEGIN |
|
39
|
17 |
n/a |
BEGIN |
|
40
|
17 |
n/a |
BEGIN |
|
41
|
17 |
n/a |
BEGIN |
|
42
|
17 |
n/a |
BEGIN |
|
43
|
17 |
n/a |
BEGIN |
|
44
|
17 |
n/a |
BEGIN |
|
45
|
17 |
n/a |
BEGIN |
|
46
|
17 |
n/a |
BEGIN |
|
47
|
17 |
n/a |
BEGIN |
|
48
|
17 |
n/a |
BEGIN |
|
49
|
17 |
n/a |
BEGIN |
|
164
|
0 |
n/a |
_build_ncbi_tax |
|
220
|
0 |
n/a |
_build_gi_mapper |
|
233
|
0 |
n/a |
_build_is_deleted |
|
251
|
0 |
n/a |
_build_merged_for |
|
270
|
0 |
n/a |
_build_misleading_for |
|
291
|
0 |
n/a |
_build_dupes_for |
|
333
|
17 |
n/a |
BEGIN |
|
337
|
17 |
n/a |
BEGIN |
|
379
|
0 |
n/a |
_build_rank_for |
|
384
|
0 |
n/a |
_build_strain_taxid_for |
|
423
|
0 |
n/a |
_clean_strain |
|
436
|
0 |
n/a |
_make_hashkey |
|
452
|
0 |
n/a |
_build_matcher |
|
477
|
0 |
n/a |
_matcher_matrix |
|
481
|
0 |
n/a |
_match_code |
|
694
|
0 |
Yes |
fetch_lineage |
|
699
|
0 |
Yes |
get_taxid_from_taxonomy |
|
714
|
17 |
n/a |
BEGIN |
|
716
|
17 |
n/a |
BEGIN |
|
740
|
0 |
n/a |
_taxonomy_from_seq_id_ |
|
762
|
0 |
Yes |
get_taxa_from_taxid |
|
798
|
0 |
Yes |
get_common_taxonomy_from_seq_ids |
|
817
|
0 |
Yes |
compute_lca |
|
821
|
0 |
n/a |
_common_taxonomy |
|
852
|
0 |
n/a |
__ANON__ |
|
853
|
0 |
n/a |
__ANON__ |
|
869
|
0 |
Yes |
attach_taxonomies_to_terminals |
|
894
|
0 |
Yes |
attach_taxonomies_to_internals |
|
902
|
0 |
n/a |
__ANON__ |
|
933
|
0 |
Yes |
attach_taxa_to_entities |
|
1018
|
0 |
Yes |
gi_mapper |
|
1032
|
0 |
n/a |
_taxids_from_gis |
|
1046
|
0 |
n/a |
__ANON__ |
|
1049
|
0 |
n/a |
__ANON__ |
|
1094
|
0 |
n/a |
__ANON__ |
|
1095
|
0 |
n/a |
__ANON__ |
|
1140
|
0 |
Yes |
tab_mapper |
|
1206
|
0 |
Yes |
tax_mapper |
|
1220
|
0 |
Yes |
tax_filter |
|
1229
|
0 |
Yes |
tax_criterion |
|
1240
|
0 |
Yes |
tax_category |
|
1255
|
0 |
Yes |
tax_classifier |
|
1343
|
0 |
Yes |
tax_labeler_from_systematic_frame |
|
1372
|
0 |
Yes |
tax_labeler_from_list |
|
1381
|
0 |
Yes |
load_color_scheme |
|
1389
|
0 |
Yes |
eq_tax |
|
1417
|
0 |
Yes |
new_from_cache |
|
1431
|
0 |
Yes |
update_cache |
|
1446
|
0 |
Yes |
setup_taxdir |
|
1463
|
0 |
n/a |
_setup_ncbi_taxdir |
|
1549
|
0 |
n/a |
_make_gca_files |
|
1758
|
0 |
n/a |
_setup_gtdb_taxdir |
|
1851
|
0 |
n/a |
__ANON__ |
|
1927
|
0 |
n/a |
_read_gtdb_metadata |
|
1952
|
0 |
n/a |
_write_dmp_files |
|
1984
|
0 |
n/a |
_append2dmp |
|
2003
|
17 |
n/a |
BEGIN |