| blib/lib/Bio/MUST/Apps/TwoScalp/Seq2Seq.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 0 | 22 | 0.0 |
| line | true | false | branch |
|---|---|---|---|
| 99 | 0 | 0 | unless $bo |
| 101 | 0 | 0 | $self->single_hsp ? : |
| 122 | 0 | 0 | if $coverage < $best_coverage * $self->coverage_mul |
| 141 | 0 | 0 | unless (@templates) |
| 146 | 0 | 0 | if $self->single_hsp |
| 153 | 0 | 0 | unless $template_seq |
| 166 | 0 | 0 | unless $self->single_hsp |
| 184 | 0 | 0 | if ($query_seqs->type eq "nucl" and $blastdb->type eq "nucl" and $hsp->hit_strand == -1) |
| 200 | 0 | 0 | if $self->single_hsp |
| 219 | 0 | 0 | unless ($ali->count_seqs) |
| 231 | 0 | 0 | $_->is_aligned ? : |